CDS
| Accession Number | TCMCG057C43535 |
| gbkey | CDS |
| Protein Id | XP_018449163.1 |
| Location | join(3784690..3784704,3784964..3785105,3785209..3785376,3785464..3785616,3785713..3785865,3785980..3786144,3786235..3786357,3786453..3786642,3786734..3786938,3787019..3787156) |
| Gene | LOC108820665 |
| GeneID | 108820665 |
| Organism | Raphanus sativus |
Protein
| Length | 483aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018593661.1 |
| Definition | PREDICTED: tip elongation aberrant protein 1-like isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Galactose oxidase kelch, beta-propeller (InterPro IPR011043), Kelch repeat type 1 (InterPro IPR006652), Kelch repeat type 2 (InterPro IPR011498), Kelch-type beta propeller (InterPro IPR015915) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K20285
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCTTCGACGCTGATATGGACTCAGCCGATGGTCAGTGGCACGCCTCCTCCTCCTAGGGACAGTCACAGCTGTACAACAGTCGGCGACAACCTTATTGTGTTTGGTGGTACTGATGGAATCAAATCTCTCAATGATTTGTACATTCTTGACACTTCTTCACATACTTGGAAGTGTCAGAGTGTTAGGGGTGAAGGACCTGCGCCAAGAGAAGGTCATAGCGCAACACTCGTTGGTAAAAGGCTTTTTGTTTTTGGTGGCTGTGGGAAATCTCCTCATGTTAATGACGAAATCTATTATAATGACCTTTACATACTTAACACAGAGACTTATGTGTGGAAACGTGCTGCTACGATTGGATGTCCACCATCTGCGCGAGATAGCCACACTTGCTCATCGTGGAAGAACAAAATCCTTGTCATAGGTGGTGAAGATGGTCACGACTATTATCTGTCTGATGTTCATATCCTTGATACAGATACATTCATATGGAAGGAGCTGGATACTTCGGGGCAGTTACTGACACCTCGAGCTGGTCATGTTACTGTTTCACTTGGGAGGAACTTGTATGTGTTTGGAGGGTTTACGGATGCTCAGAATCTTTACGATGATCTCTATGTGCTTGATCTTGATACGTGTGTATGGTCAAAGGTTCTCACCATAGGAGAAGGTCCGTCTGCGAGGTTCTCTTCTGCAGGGGCTTGTTTAGATCCTCACAAATCCGGATTTCTTGTCTTTCTTGGTGGCTGCAATAAAAATCTTGAGGCACTGGATGATATGTTCTACTTACACACAGGACTTGGATATGATGCAAGGCTTGATCAAAATGTAGGGAGCATGTCTCTAAAGAAGCAACTGAAGTTGAAATGCCAAGAACAAACTCACGCTAGTTCCTTTGGAATCAATATGGATCATCAAGGAAGAGGGAGTTTTGGGTTGAACAATGGCCAATTTGATCAGGGAAAAATGATGTTCCAAGCCAAGGTAACCGAGAGGTTCCCTGTTGGTTACAGTATAGAAACAATGATAGGTGGGAAAGTGCTTCGTGGCGTTTTGTTTTCAACCAAGCAGAGCTCCGCTCTGGCGACTGATCATCAAAGCCTGAGTAGAAAGAGGCCAGCTATGTCCAACGGTGACCATGATAACAGTTTAAAGATACCAAAAAGTTTGAGCAAGGATCAAACTGATGCTACCGAATCCAAAGATTCTCCATCAATGGGAATGGAGGGTGGTGGTGGTAGTGGTCTCATCAGCAACCCTCTGGATGTTAACATAAACACAGTGGAAGTGGCAGTGGCACCTCAGCTTGATGTGGGGGGCAATGTGAATACAGCAGCAGCTCAATCTTCATCAGTTCCTGAGACAGAGGAAGCTTCTTTAGAATCTAGAAATGCGGTGTCGATTGATGTTGGAGCTACTAATAAGACCGGACCTGGAGAGTCATCATCATAG |
| Protein: MSSTLIWTQPMVSGTPPPPRDSHSCTTVGDNLIVFGGTDGIKSLNDLYILDTSSHTWKCQSVRGEGPAPREGHSATLVGKRLFVFGGCGKSPHVNDEIYYNDLYILNTETYVWKRAATIGCPPSARDSHTCSSWKNKILVIGGEDGHDYYLSDVHILDTDTFIWKELDTSGQLLTPRAGHVTVSLGRNLYVFGGFTDAQNLYDDLYVLDLDTCVWSKVLTIGEGPSARFSSAGACLDPHKSGFLVFLGGCNKNLEALDDMFYLHTGLGYDARLDQNVGSMSLKKQLKLKCQEQTHASSFGINMDHQGRGSFGLNNGQFDQGKMMFQAKVTERFPVGYSIETMIGGKVLRGVLFSTKQSSALATDHQSLSRKRPAMSNGDHDNSLKIPKSLSKDQTDATESKDSPSMGMEGGGGSGLISNPLDVNINTVEVAVAPQLDVGGNVNTAAAQSSSVPETEEASLESRNAVSIDVGATNKTGPGESSS |